Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Gm13474-201ENSMUST00000122466 815 ntBASIC17.02■□□□□ 0.32
Usp43Q8BUM9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp43Q8BUM9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp43Q8BUM9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp43Q8BUM9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17■□□□□ 0.31
Usp43Q8BUM9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gm13186-201ENSMUST00000118031 316 ntBASIC17■□□□□ 0.31
Usp43Q8BUM9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gm7889-201ENSMUST00000185591 958 ntBASIC17■□□□□ 0.31
Usp43Q8BUM9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17■□□□□ 0.31
Usp43Q8BUM9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17■□□□□ 0.31
Usp43Q8BUM9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17■□□□□ 0.31
Usp43Q8BUM9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gm6190-201ENSMUST00000220683 1374 ntBASIC17■□□□□ 0.31
Usp43Q8BUM9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17■□□□□ 0.31
Usp43Q8BUM9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp43Q8BUM9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.99■□□□□ 0.31
Usp43Q8BUM9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp43Q8BUM9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms