Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf7Q8BTV2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf7Q8BTV2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Gm12527-201ENSMUST00000117967 564 ntBASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf7Q8BTV2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf7Q8BTV2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cpsf7Q8BTV2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cpsf7Q8BTV2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf7Q8BTV2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cpsf7Q8BTV2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms