Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpne3Q8BT60 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Gm10698-201ENSMUST00000182663 604 ntBASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cpne3Q8BT60 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Gm10653-202ENSMUST00000139570 835 ntBASIC16.22■□□□□ 0.19
Cpne3Q8BT60 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.22■□□□□ 0.19
Cpne3Q8BT60 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne3Q8BT60 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cpne3Q8BT60 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cpne3Q8BT60 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cpne3Q8BT60 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms