Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rd3Q8BRE0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rd3Q8BRE0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Gm34391-201ENSMUST00000203706 907 ntBASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rd3Q8BRE0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Mzt1-203ENSMUST00000227948 952 ntBASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
Rd3Q8BRE0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.81■□□□□ 0.44
Rd3Q8BRE0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rd3Q8BRE0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rd3Q8BRE0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms