Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcaf1Q8BNE1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.17■□□□□ 0.5
Tcaf1Q8BNE1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcaf1Q8BNE1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tcaf1Q8BNE1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcaf1Q8BNE1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Gm44450-201ENSMUST00000199528 114 ntBASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcaf1Q8BNE1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tcaf1Q8BNE1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Mir770-201ENSMUST00000103252 94 ntBASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Gm29518-201ENSMUST00000190858 372 ntBASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tcaf1Q8BNE1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tcaf1Q8BNE1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Tcaf1Q8BNE1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms