Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col16a1Q8BLX7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Gm14494-201ENSMUST00000118786 435 ntBASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col16a1Q8BLX7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Gm16499-203ENSMUST00000204633 2177 ntBASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col16a1Q8BLX7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col16a1Q8BLX7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC22.02■■□□□ 1.12
Col16a1Q8BLX7 AC107711.5-202ENSMUST00000226429 702 ntBASIC22.02■■□□□ 1.12
Col16a1Q8BLX7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Col16a1Q8BLX7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Gm25745-201ENSMUST00000174945 133 ntBASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Gm7506-201ENSMUST00000207758 815 ntBASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 AC154222.1-201ENSMUST00000223882 475 ntBASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col16a1Q8BLX7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm5112-201ENSMUST00000204407 2368 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm14140-201ENSMUST00000119999 995 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm15173-201ENSMUST00000122049 433 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm6736-201ENSMUST00000166583 948 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm8349-201ENSMUST00000182720 1003 ntBASIC22■■□□□ 1.11
Col16a1Q8BLX7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col16a1Q8BLX7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Gm2756-201ENSMUST00000195851 400 ntBASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col16a1Q8BLX7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms