Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp1Q8BJQ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp1Q8BJQ2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp1Q8BJQ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp1Q8BJQ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Usp1Q8BJQ2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp1Q8BJQ2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp1Q8BJQ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp1Q8BJQ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms