Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Gm37025-201ENSMUST00000195159 829 ntBASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Mir1199-201ENSMUST00000117015 119 ntBASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc40Q8BI79 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc40Q8BI79 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccdc40Q8BI79 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Gm27011-201ENSMUST00000182352 972 ntBASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc40Q8BI79 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Gm22240-201ENSMUST00000175225 82 ntBASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc40Q8BI79 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Gm17661-201ENSMUST00000170317 270 ntBASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc40Q8BI79 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms