Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1bQ8BH88 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1bQ8BH88 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Gm27463-201ENSMUST00000183569 57 ntBASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Gm38027-201ENSMUST00000192315 235 ntBASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Depdc1bQ8BH88 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Depdc1bQ8BH88 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1bQ8BH88 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1bQ8BH88 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1bQ8BH88 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1bQ8BH88 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Gm37025-201ENSMUST00000195159 829 ntBASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.26■□□□□ 0.51
Depdc1bQ8BH88 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms