Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc5a7Q8BGY9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Slc5a7Q8BGY9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc5a7Q8BGY9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc5a7Q8BGY9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Slc5a7Q8BGY9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Slc5a7Q8BGY9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms