Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smndc1Q8BGT7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Gm12527-201ENSMUST00000117967 564 ntBASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.35■□□□□ 0.21
Smndc1Q8BGT7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Gm20049-201ENSMUST00000219950 730 ntBASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smndc1Q8BGT7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smndc1Q8BGT7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smndc1Q8BGT7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smndc1Q8BGT7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smndc1Q8BGT7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smndc1Q8BGT7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms