Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Gm37025-201ENSMUST00000195159 829 ntBASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Gm18669-201ENSMUST00000216049 778 ntBASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
U2af1l4Q8BGJ9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Gm16061-201ENSMUST00000122167 857 ntBASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Gm5587-201ENSMUST00000206270 674 ntBASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
U2af1l4Q8BGJ9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.78■□□□□ 0.76
U2af1l4Q8BGJ9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Gm5867-201ENSMUST00000063197 592 ntBASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.77■□□□□ 0.76
U2af1l4Q8BGJ9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.77■□□□□ 0.75
U2af1l4Q8BGJ9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1l4Q8BGJ9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
U2af1l4Q8BGJ9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2af1l4Q8BGJ9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms