Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.58■□□□□ 0.25
Ubp1Q811S7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubp1Q811S7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubp1Q811S7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubp1Q811S7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubp1Q811S7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.55■□□□□ 0.24
Ubp1Q811S7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.55■□□□□ 0.24
Ubp1Q811S7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubp1Q811S7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.54■□□□□ 0.24
Ubp1Q811S7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.54■□□□□ 0.24
Ubp1Q811S7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubp1Q811S7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.54■□□□□ 0.24
Ubp1Q811S7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ubp1Q811S7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms