Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bQ80YF6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Upk3bQ80YF6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bQ80YF6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms