Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.53■□□□□ 0.4
Srrm3Q80WV7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm3Q80WV7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Gm10231-201ENSMUST00000181584 441 ntBASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Gm10175-202ENSMUST00000208752 441 ntBASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm3Q80WV7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.52■□□□□ 0.39
Srrm3Q80WV7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Srrm3Q80WV7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Srrm3Q80WV7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.51■□□□□ 0.39
Srrm3Q80WV7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Srrm3Q80WV7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.49■□□□□ 0.39
Srrm3Q80WV7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms