Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.26■□□□□ 0.19
Trim36Q80WG7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim36Q80WG7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.25■□□□□ 0.19
Trim36Q80WG7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.25■□□□□ 0.19
Trim36Q80WG7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim36Q80WG7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Gm10138-203ENSMUST00000206952 366 ntBASIC16.24■□□□□ 0.19
Trim36Q80WG7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.24■□□□□ 0.19
Trim36Q80WG7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim36Q80WG7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Gm43183-201ENSMUST00000200632 547 ntBASIC16.23■□□□□ 0.19
Trim36Q80WG7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim36Q80WG7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.22■□□□□ 0.19
Trim36Q80WG7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.22■□□□□ 0.19
Trim36Q80WG7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trim36Q80WG7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.22■□□□□ 0.19
Trim36Q80WG7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.22■□□□□ 0.19
Trim36Q80WG7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms