Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.29■□□□□ 0.52
Sh3tc2Q80VA5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Gm15794-201ENSMUST00000120182 631 ntBASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3tc2Q80VA5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Gm43347-201ENSMUST00000200226 580 ntBASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3tc2Q80VA5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sh3tc2Q80VA5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3tc2Q80VA5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3tc2Q80VA5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sh3tc2Q80VA5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Sh3tc2Q80VA5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Gm11452-201ENSMUST00000122376 690 ntBASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3tc2Q80VA5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms