Protein–RNA interactions for Protein: Q78IS1

Tmed3, Transmembrane emp24 domain-containing protein 3, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed3Q78IS1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmed3Q78IS1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmed3Q78IS1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmed3Q78IS1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmed3Q78IS1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Serp2-204ENSMUST00000228055 705 ntBASIC14.17□□□□□ -0.14
Tmed3Q78IS1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmed3Q78IS1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmed3Q78IS1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmed3Q78IS1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tmed3Q78IS1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmed3Q78IS1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tmed3Q78IS1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmed3Q78IS1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms