Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Gm11355-201ENSMUST00000121120 306 ntBASIC17.42■□□□□ 0.38
Cspg5Q71M36 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Gm9731-201ENSMUST00000209480 747 ntBASIC17.42■□□□□ 0.38
Cspg5Q71M36 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cspg5Q71M36 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.41■□□□□ 0.38
Cspg5Q71M36 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.41■□□□□ 0.38
Cspg5Q71M36 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Mzt1-203ENSMUST00000227948 952 ntBASIC17.41■□□□□ 0.38
Cspg5Q71M36 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg5Q71M36 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.4■□□□□ 0.38
Cspg5Q71M36 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg5Q71M36 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cspg5Q71M36 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Gm26039-201ENSMUST00000158152 144 ntBASIC17.39■□□□□ 0.37
Cspg5Q71M36 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cspg5Q71M36 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg5Q71M36 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.38■□□□□ 0.37
Cspg5Q71M36 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.38■□□□□ 0.37
Cspg5Q71M36 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.38■□□□□ 0.37
Cspg5Q71M36 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cspg5Q71M36 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Gm10418-201ENSMUST00000100943 576 ntBASIC17.37■□□□□ 0.37
Cspg5Q71M36 Mir770-201ENSMUST00000103252 94 ntBASIC17.37■□□□□ 0.37
Cspg5Q71M36 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.37■□□□□ 0.37
Cspg5Q71M36 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms