Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm8Q6ZWM4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lsm8Q6ZWM4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Mir6982-201ENSMUST00000184354 68 ntBASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm8Q6ZWM4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm8Q6ZWM4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Gm18115-201ENSMUST00000221209 621 ntBASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm8Q6ZWM4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm8Q6ZWM4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm8Q6ZWM4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm8Q6ZWM4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm8Q6ZWM4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.58■□□□□ 0.4
Lsm8Q6ZWM4 Mir1668-201ENSMUST00000184114 107 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms