Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Gm29791-202ENSMUST00000207888 369 ntBASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Casc1Q6TDU8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Gm37055-201ENSMUST00000191866 133 ntBASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Casc1Q6TDU8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Casc1Q6TDU8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Casc1Q6TDU8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Casc1Q6TDU8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Casc1Q6TDU8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Gm10517-202ENSMUST00000192970 758 ntBASIC20.06■□□□□ 0.8
Casc1Q6TDU8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Casc1Q6TDU8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Casc1Q6TDU8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms