Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.04■□□□□ 0.64
Scn10aQ6QIY3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn10aQ6QIY3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn10aQ6QIY3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.02■□□□□ 0.63
Scn10aQ6QIY3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Scn10aQ6QIY3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scn10aQ6QIY3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn10aQ6QIY3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19■□□□□ 0.63
Scn10aQ6QIY3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19■□□□□ 0.63
Scn10aQ6QIY3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19■□□□□ 0.63
Scn10aQ6QIY3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scn10aQ6QIY3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Gm9172-201ENSMUST00000212092 954 ntBASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn10aQ6QIY3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Gm27397-201ENSMUST00000184997 107 ntBASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn10aQ6QIY3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn10aQ6QIY3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms