Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp40Q6PE01 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Snrnp40Q6PE01 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Gm12350-201ENSMUST00000121208 462 ntBASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Snrnp40Q6PE01 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Gm2213-201ENSMUST00000197485 688 ntBASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Gm5364-201ENSMUST00000216789 889 ntBASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Snrnp40Q6PE01 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Gm44430-201ENSMUST00000203376 995 ntBASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Snrnp40Q6PE01 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms