Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim37Q6PCX9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim37Q6PCX9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim37Q6PCX9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trim37Q6PCX9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Gm7638-201ENSMUST00000121348 967 ntBASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Gm27525-201ENSMUST00000184465 107 ntBASIC18.64■□□□□ 0.57
Trim37Q6PCX9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim37Q6PCX9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Gm6623-201ENSMUST00000173570 544 ntBASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Gm27459-201ENSMUST00000184860 107 ntBASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Gm18206-201ENSMUST00000207027 926 ntBASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim37Q6PCX9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim37Q6PCX9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim37Q6PCX9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms