Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.61■□□□□ 0.57
Krt39Q6IFX4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt39Q6IFX4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt39Q6IFX4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Krt39Q6IFX4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.58■□□□□ 0.57
Krt39Q6IFX4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Krt39Q6IFX4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt39Q6IFX4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt39Q6IFX4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt39Q6IFX4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt39Q6IFX4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt39Q6IFX4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt39Q6IFX4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt39Q6IFX4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt39Q6IFX4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms