Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga7Q6DD96 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga7Q6DD96 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Gm37025-201ENSMUST00000195159 829 ntBASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga7Q6DD96 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga7Q6DD96 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Gm10653-202ENSMUST00000139570 835 ntBASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Gm29257-201ENSMUST00000186115 639 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms