Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scube3Q66PY1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scube3Q66PY1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.64■□□□□ 0.41
Scube3Q66PY1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube3Q66PY1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scube3Q66PY1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.62■□□□□ 0.41
Scube3Q66PY1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scube3Q66PY1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Gm11355-201ENSMUST00000121120 306 ntBASIC17.61■□□□□ 0.41
Scube3Q66PY1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.61■□□□□ 0.41
Scube3Q66PY1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.61■□□□□ 0.41
Scube3Q66PY1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scube3Q66PY1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.6■□□□□ 0.41
Scube3Q66PY1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms