Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.37■□□□□ 0.85
Col11a2Q64739 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Col11a2Q64739 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Col11a2Q64739 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.36■□□□□ 0.85
Col11a2Q64739 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.36■□□□□ 0.85
Col11a2Q64739 Chchd1-203ENSMUST00000224633 557 ntBASIC20.36■□□□□ 0.85
Col11a2Q64739 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Col11a2Q64739 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.36■□□□□ 0.85
Col11a2Q64739 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.36■□□□□ 0.85
Col11a2Q64739 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.36■□□□□ 0.85
Col11a2Q64739 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.36■□□□□ 0.85
Col11a2Q64739 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.36■□□□□ 0.85
Col11a2Q64739 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col11a2Q64739 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.35■□□□□ 0.85
Col11a2Q64739 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.35■□□□□ 0.85
Col11a2Q64739 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col11a2Q64739 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Col11a2Q64739 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.34■□□□□ 0.85
Col11a2Q64739 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.34■□□□□ 0.85
Col11a2Q64739 Gm25406-201ENSMUST00000157599 105 ntBASIC20.34■□□□□ 0.85
Col11a2Q64739 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Col11a2Q64739 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col11a2Q64739 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.34■□□□□ 0.85
Col11a2Q64739 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Col11a2Q64739 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.33■□□□□ 0.85
Col11a2Q64739 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col11a2Q64739 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.33■□□□□ 0.85
Col11a2Q64739 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.33■□□□□ 0.85
Col11a2Q64739 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col11a2Q64739 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col11a2Q64739 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.33■□□□□ 0.85
Col11a2Q64739 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col11a2Q64739 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col11a2Q64739 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col11a2Q64739 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col11a2Q64739 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.33■□□□□ 0.84
Col11a2Q64739 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.33■□□□□ 0.84
Col11a2Q64739 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.33■□□□□ 0.84
Col11a2Q64739 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Col11a2Q64739 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.32■□□□□ 0.84
Col11a2Q64739 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.32■□□□□ 0.84
Col11a2Q64739 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col11a2Q64739 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Col11a2Q64739 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.32■□□□□ 0.84
Col11a2Q64739 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col11a2Q64739 Gm7222-201ENSMUST00000117512 906 ntBASIC20.32■□□□□ 0.84
Col11a2Q64739 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.32■□□□□ 0.84
Col11a2Q64739 Mir3113-201ENSMUST00000175478 76 ntBASIC20.32■□□□□ 0.84
Col11a2Q64739 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col11a2Q64739 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.31■□□□□ 0.84
Col11a2Q64739 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.31■□□□□ 0.84
Col11a2Q64739 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.31■□□□□ 0.84
Col11a2Q64739 Gm5682-201ENSMUST00000173402 505 ntBASIC20.31■□□□□ 0.84
Col11a2Q64739 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col11a2Q64739 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.3■□□□□ 0.84
Col11a2Q64739 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms