Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Idnk-204ENSMUST00000226010 1898 ntBASIC13.93□□□□□ -0.18
Col7a1Q63870 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col7a1Q63870 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Gm43474-201ENSMUST00000196415 774 ntBASIC13.93□□□□□ -0.18
Col7a1Q63870 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Gm45612-201ENSMUST00000211320 160 ntBASIC13.93□□□□□ -0.18
Col7a1Q63870 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.93□□□□□ -0.18
Col7a1Q63870 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.93□□□□□ -0.18
Col7a1Q63870 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.93□□□□□ -0.18
Col7a1Q63870 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col7a1Q63870 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.92□□□□□ -0.18
Col7a1Q63870 Gm27437-201ENSMUST00000183429 107 ntBASIC13.92□□□□□ -0.18
Col7a1Q63870 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Gm25948-201ENSMUST00000175334 112 ntBASIC13.92□□□□□ -0.18
Col7a1Q63870 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.92□□□□□ -0.18
Col7a1Q63870 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col7a1Q63870 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Col7a1Q63870 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.91□□□□□ -0.18
Col7a1Q63870 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.91□□□□□ -0.18
Col7a1Q63870 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col7a1Q63870 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col7a1Q63870 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.91□□□□□ -0.18
Col7a1Q63870 Mir6990-201ENSMUST00000183724 91 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Gm7222-201ENSMUST00000117512 906 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Mir1895-201ENSMUST00000122615 79 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Gm29707-201ENSMUST00000196325 491 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Gm7653-201ENSMUST00000214567 508 ntBASIC13.91□□□□□ -0.18
Col7a1Q63870 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col7a1Q63870 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.9□□□□□ -0.18
Col7a1Q63870 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Gm18187-201ENSMUST00000196476 984 ntBASIC13.9□□□□□ -0.18
Col7a1Q63870 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.9□□□□□ -0.18
Col7a1Q63870 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col7a1Q63870 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.9□□□□□ -0.18
Col7a1Q63870 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col7a1Q63870 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col7a1Q63870 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col7a1Q63870 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col7a1Q63870 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms