Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six2Q62232 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.93■□□□□ 0.46
Six2Q62232 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Six2Q62232 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.93■□□□□ 0.46
Six2Q62232 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Six2Q62232 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Six2Q62232 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.92■□□□□ 0.46
Six2Q62232 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Six2Q62232 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Gm13186-201ENSMUST00000118031 316 ntBASIC17.92■□□□□ 0.46
Six2Q62232 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Six2Q62232 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.92■□□□□ 0.46
Six2Q62232 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Six2Q62232 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Six2Q62232 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six2Q62232 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Six2Q62232 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Six2Q62232 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.91■□□□□ 0.46
Six2Q62232 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Six2Q62232 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Six2Q62232 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six2Q62232 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.9■□□□□ 0.46
Six2Q62232 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Six2Q62232 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six2Q62232 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Six2Q62232 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.9■□□□□ 0.46
Six2Q62232 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Six2Q62232 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six2Q62232 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.9■□□□□ 0.46
Six2Q62232 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six2Q62232 Phf7-203ENSMUST00000226565 1971 ntBASIC17.9■□□□□ 0.46
Six2Q62232 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Six2Q62232 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Six2Q62232 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.89■□□□□ 0.45
Six2Q62232 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Six2Q62232 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.89■□□□□ 0.45
Six2Q62232 Gm13559-201ENSMUST00000120476 863 ntBASIC17.89■□□□□ 0.45
Six2Q62232 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Six2Q62232 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six2Q62232 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Six2Q62232 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.88■□□□□ 0.45
Six2Q62232 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.88■□□□□ 0.45
Six2Q62232 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Six2Q62232 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Six2Q62232 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.88■□□□□ 0.45
Six2Q62232 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six2Q62232 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six2Q62232 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms