Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.25■□□□□ 0.35
Six1Q62231 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six1Q62231 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Mir1199-201ENSMUST00000117015 119 ntBASIC17.24■□□□□ 0.35
Six1Q62231 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Six1Q62231 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Six1Q62231 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six1Q62231 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.23■□□□□ 0.35
Six1Q62231 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Six1Q62231 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.23■□□□□ 0.35
Six1Q62231 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Six1Q62231 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.23■□□□□ 0.35
Six1Q62231 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six1Q62231 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Six1Q62231 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.22■□□□□ 0.35
Six1Q62231 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.22■□□□□ 0.35
Six1Q62231 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.22■□□□□ 0.35
Six1Q62231 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six1Q62231 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Six1Q62231 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Six1Q62231 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.21■□□□□ 0.35
Six1Q62231 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.21■□□□□ 0.35
Six1Q62231 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Six1Q62231 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six1Q62231 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six1Q62231 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.21■□□□□ 0.34
Six1Q62231 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six1Q62231 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.2■□□□□ 0.34
Six1Q62231 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.2■□□□□ 0.34
Six1Q62231 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.2■□□□□ 0.34
Six1Q62231 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.2■□□□□ 0.34
Six1Q62231 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.2■□□□□ 0.34
Six1Q62231 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six1Q62231 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six1Q62231 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms