Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn9aQ62205 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Gm27397-201ENSMUST00000184997 107 ntBASIC19.79■□□□□ 0.76
Scn9aQ62205 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.79■□□□□ 0.76
Scn9aQ62205 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scn9aQ62205 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Scn9aQ62205 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Gm13418-201ENSMUST00000119097 944 ntBASIC19.78■□□□□ 0.76
Scn9aQ62205 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Scn9aQ62205 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn9aQ62205 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn9aQ62205 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn9aQ62205 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scn9aQ62205 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn9aQ62205 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn9aQ62205 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn9aQ62205 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.77■□□□□ 0.76
Scn9aQ62205 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Scn9aQ62205 Gm27628-201ENSMUST00000184911 107 ntBASIC19.77■□□□□ 0.76
Scn9aQ62205 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn9aQ62205 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn9aQ62205 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Scn9aQ62205 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn9aQ62205 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn9aQ62205 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.77■□□□□ 0.75
Scn9aQ62205 Gm10576-201ENSMUST00000191927 825 ntBASIC19.77■□□□□ 0.75
Scn9aQ62205 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.77■□□□□ 0.75
Scn9aQ62205 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn9aQ62205 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn9aQ62205 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.77■□□□□ 0.75
Scn9aQ62205 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.77■□□□□ 0.75
Scn9aQ62205 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn9aQ62205 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Scn9aQ62205 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn9aQ62205 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 AV026068-213ENSMUST00000223675 1171 ntBASIC19.76■□□□□ 0.75
Scn9aQ62205 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Scn9aQ62205 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn9aQ62205 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.76■□□□□ 0.75
Scn9aQ62205 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn9aQ62205 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn9aQ62205 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Scn9aQ62205 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.75■□□□□ 0.75
Scn9aQ62205 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn9aQ62205 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn9aQ62205 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn9aQ62205 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.74■□□□□ 0.75
Scn9aQ62205 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn9aQ62205 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.74■□□□□ 0.75
Scn9aQ62205 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Scn9aQ62205 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn9aQ62205 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn9aQ62205 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.74■□□□□ 0.75
Scn9aQ62205 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms