Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.65■□□□□ 0.9
Trim27Q62158 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim27Q62158 Gm7213-201ENSMUST00000215977 950 ntBASIC20.65■□□□□ 0.9
Trim27Q62158 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim27Q62158 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.64■□□□□ 0.9
Trim27Q62158 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim27Q62158 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim27Q62158 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trim27Q62158 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim27Q62158 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim27Q62158 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim27Q62158 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.64■□□□□ 0.89
Trim27Q62158 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim27Q62158 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim27Q62158 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim27Q62158 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Gm13474-201ENSMUST00000122466 815 ntBASIC20.63■□□□□ 0.89
Trim27Q62158 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Gm45058-201ENSMUST00000205810 766 ntBASIC20.63■□□□□ 0.89
Trim27Q62158 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim27Q62158 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim27Q62158 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim27Q62158 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim27Q62158 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim27Q62158 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim27Q62158 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Trim27Q62158 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim27Q62158 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trim27Q62158 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim27Q62158 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim27Q62158 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim27Q62158 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim27Q62158 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.61■□□□□ 0.89
Trim27Q62158 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim27Q62158 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim27Q62158 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Trim27Q62158 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim27Q62158 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim27Q62158 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Mir5130-201ENSMUST00000175160 84 ntBASIC20.6■□□□□ 0.89
Trim27Q62158 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim27Q62158 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim27Q62158 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Trim27Q62158 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.6■□□□□ 0.89
Trim27Q62158 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim27Q62158 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim27Q62158 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms