Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.77■□□□□ 0.11
VcanQ62059 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
VcanQ62059 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
VcanQ62059 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VcanQ62059 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.76■□□□□ 0.11
VcanQ62059 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.76■□□□□ 0.11
VcanQ62059 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
VcanQ62059 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VcanQ62059 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.76■□□□□ 0.11
VcanQ62059 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VcanQ62059 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VcanQ62059 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.76■□□□□ 0.11
VcanQ62059 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.76■□□□□ 0.11
VcanQ62059 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.76■□□□□ 0.11
VcanQ62059 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VcanQ62059 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VcanQ62059 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VcanQ62059 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Gm4535-201ENSMUST00000182274 558 ntBASIC15.75■□□□□ 0.11
VcanQ62059 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.75■□□□□ 0.11
VcanQ62059 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.75■□□□□ 0.11
VcanQ62059 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Gm10355-201ENSMUST00000097146 517 ntBASIC15.75■□□□□ 0.11
VcanQ62059 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.75■□□□□ 0.11
VcanQ62059 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Mir8117-201ENSMUST00000184773 107 ntBASIC15.75■□□□□ 0.11
VcanQ62059 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.75■□□□□ 0.11
VcanQ62059 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.75■□□□□ 0.11
VcanQ62059 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Gm11780-201ENSMUST00000136880 516 ntBASIC15.75■□□□□ 0.11
VcanQ62059 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VcanQ62059 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VcanQ62059 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VcanQ62059 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VcanQ62059 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
VcanQ62059 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.73■□□□□ 0.11
VcanQ62059 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.73■□□□□ 0.11
VcanQ62059 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VcanQ62059 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VcanQ62059 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VcanQ62059 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.73■□□□□ 0.11
VcanQ62059 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.73■□□□□ 0.11
VcanQ62059 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.73■□□□□ 0.11
VcanQ62059 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.73■□□□□ 0.11
VcanQ62059 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.73■□□□□ 0.11
VcanQ62059 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.73■□□□□ 0.11
VcanQ62059 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.73■□□□□ 0.11
VcanQ62059 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms