Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctr9Q62018 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.83■□□□□ 0.77
Ctr9Q62018 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.83■□□□□ 0.77
Ctr9Q62018 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.83■□□□□ 0.77
Ctr9Q62018 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctr9Q62018 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ctr9Q62018 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ctr9Q62018 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctr9Q62018 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctr9Q62018 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ctr9Q62018 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ctr9Q62018 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Ctr9Q62018 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctr9Q62018 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ctr9Q62018 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.82■□□□□ 0.76
Ctr9Q62018 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Ctr9Q62018 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.82■□□□□ 0.76
Ctr9Q62018 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.82■□□□□ 0.76
Ctr9Q62018 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.82■□□□□ 0.76
Ctr9Q62018 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctr9Q62018 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ctr9Q62018 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.82■□□□□ 0.76
Ctr9Q62018 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ctr9Q62018 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.81■□□□□ 0.76
Ctr9Q62018 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Gm17808-201ENSMUST00000200859 894 ntBASIC19.81■□□□□ 0.76
Ctr9Q62018 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctr9Q62018 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ctr9Q62018 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.8■□□□□ 0.76
Ctr9Q62018 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Mir770-201ENSMUST00000103252 94 ntBASIC19.8■□□□□ 0.76
Ctr9Q62018 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Ctr9Q62018 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ctr9Q62018 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.8■□□□□ 0.76
Ctr9Q62018 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ctr9Q62018 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
Ctr9Q62018 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.79■□□□□ 0.76
Ctr9Q62018 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.79■□□□□ 0.76
Ctr9Q62018 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Gm10819-201ENSMUST00000099988 561 ntBASIC19.79■□□□□ 0.76
Ctr9Q62018 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.79■□□□□ 0.76
Ctr9Q62018 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.79■□□□□ 0.76
Ctr9Q62018 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctr9Q62018 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.78■□□□□ 0.76
Ctr9Q62018 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms