Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ift88Q61371 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ift88Q61371 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Ift88Q61371 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.64■□□□□ 0.57
Ift88Q61371 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Gm12441-201ENSMUST00000121806 588 ntBASIC18.63■□□□□ 0.57
Ift88Q61371 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ift88Q61371 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ift88Q61371 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ift88Q61371 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Ift88Q61371 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ift88Q61371 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.62■□□□□ 0.57
Ift88Q61371 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ift88Q61371 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ift88Q61371 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Ift88Q61371 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.61■□□□□ 0.57
Ift88Q61371 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.61■□□□□ 0.57
Ift88Q61371 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.61■□□□□ 0.57
Ift88Q61371 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ift88Q61371 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.6■□□□□ 0.57
Ift88Q61371 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.6■□□□□ 0.57
Ift88Q61371 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.6■□□□□ 0.57
Ift88Q61371 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ift88Q61371 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ift88Q61371 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ift88Q61371 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ift88Q61371 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Gm37856-201ENSMUST00000191634 999 ntBASIC18.59■□□□□ 0.57
Ift88Q61371 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.59■□□□□ 0.57
Ift88Q61371 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.59■□□□□ 0.57
Ift88Q61371 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.59■□□□□ 0.57
Ift88Q61371 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.59■□□□□ 0.57
Ift88Q61371 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ift88Q61371 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms