Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.32■□□□□ 0.68
Scnn1aQ61180 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scnn1aQ61180 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.31■□□□□ 0.68
Scnn1aQ61180 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scnn1aQ61180 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm12895-201ENSMUST00000122214 226 ntBASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm10052-201ENSMUST00000168019 960 ntBASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm7729-201ENSMUST00000050143 801 ntBASIC19.3■□□□□ 0.68
Scnn1aQ61180 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scnn1aQ61180 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm24589-201ENSMUST00000116692 94 ntBASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm34391-201ENSMUST00000203706 907 ntBASIC19.29■□□□□ 0.68
Scnn1aQ61180 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scnn1aQ61180 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.28■□□□□ 0.68
Scnn1aQ61180 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.28■□□□□ 0.68
Scnn1aQ61180 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Gm44430-201ENSMUST00000203376 995 ntBASIC19.28■□□□□ 0.68
Scnn1aQ61180 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.28■□□□□ 0.68
Scnn1aQ61180 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms