Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Ptch1Q61115 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
Ptch1Q61115 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC24.23■■□□□ 1.47
Ptch1Q61115 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC24.23■■□□□ 1.47
Ptch1Q61115 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC24.23■■□□□ 1.47
Ptch1Q61115 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC24.23■■□□□ 1.47
Ptch1Q61115 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 Dmtn-210ENSMUST00000228824 2377 ntBASIC24.23■■□□□ 1.47
Ptch1Q61115 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC24.23■■□□□ 1.47
Ptch1Q61115 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC24.23■■□□□ 1.47
Ptch1Q61115 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ptch1Q61115 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch1Q61115 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch1Q61115 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC24.22■■□□□ 1.47
Ptch1Q61115 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch1Q61115 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch1Q61115 Gm3928-201ENSMUST00000121141 1307 ntBASIC24.22■■□□□ 1.47
Ptch1Q61115 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ptch1Q61115 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
Ptch1Q61115 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 Gm4913-201ENSMUST00000117075 1290 ntBASIC24.21■■□□□ 1.47
Ptch1Q61115 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC24.21■■□□□ 1.47
Ptch1Q61115 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptch1Q61115 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ptch1Q61115 AC123834.2-201ENSMUST00000224038 2340 ntBASIC24.2■■□□□ 1.47
Ptch1Q61115 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ptch1Q61115 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ptch1Q61115 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ptch1Q61115 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Ptch1Q61115 AC114585.2-202ENSMUST00000228094 426 ntBASIC24.2■■□□□ 1.46
Ptch1Q61115 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch1Q61115 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch1Q61115 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ptch1Q61115 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC24.19■■□□□ 1.46
Ptch1Q61115 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptch1Q61115 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC24.18■■□□□ 1.46
Ptch1Q61115 Gm15500-202ENSMUST00000071641 1019 ntBASIC24.18■■□□□ 1.46
Ptch1Q61115 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Ptch1Q61115 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Ptch1Q61115 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ptch1Q61115 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ptch1Q61115 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Gm5186-201ENSMUST00000218781 920 ntBASIC24.18■■□□□ 1.46
Ptch1Q61115 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptch1Q61115 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Ptch1Q61115 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC24.17■■□□□ 1.46
Ptch1Q61115 AC159114.1-201ENSMUST00000220349 266 ntBASIC24.17■■□□□ 1.46
Ptch1Q61115 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Ptch1Q61115 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ptch1Q61115 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC24.17■■□□□ 1.46
Ptch1Q61115 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptch1Q61115 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC24.16■■□□□ 1.46
Ptch1Q61115 Mir8117-201ENSMUST00000184773 107 ntBASIC24.16■■□□□ 1.46
Ptch1Q61115 Gm44945-201ENSMUST00000206764 1187 ntBASIC24.16■■□□□ 1.46
Ptch1Q61115 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC24.16■■□□□ 1.46
Ptch1Q61115 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC24.16■■□□□ 1.46
Ptch1Q61115 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptch1Q61115 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms