Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sdf4Q61112 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sdf4Q61112 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.06■□□□□ 0.32
Sdf4Q61112 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Gm43799-201ENSMUST00000201845 579 ntBASIC17.05■□□□□ 0.32
Sdf4Q61112 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
Sdf4Q61112 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdf4Q61112 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Gm15565-201ENSMUST00000118890 427 ntBASIC17.04■□□□□ 0.32
Sdf4Q61112 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Sdf4Q61112 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.04■□□□□ 0.32
Sdf4Q61112 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.04■□□□□ 0.32
Sdf4Q61112 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sdf4Q61112 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdf4Q61112 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Sdf4Q61112 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.03■□□□□ 0.32
Sdf4Q61112 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.03■□□□□ 0.32
Sdf4Q61112 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdf4Q61112 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdf4Q61112 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.02■□□□□ 0.32
Sdf4Q61112 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sdf4Q61112 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.02■□□□□ 0.32
Sdf4Q61112 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Sdf4Q61112 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.02■□□□□ 0.32
Sdf4Q61112 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sdf4Q61112 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdf4Q61112 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Sdf4Q61112 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sdf4Q61112 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms