Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h4Q60641 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h4Q60641 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h4Q60641 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.02■□□□□ 0.16
Nr1h4Q60641 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Gm4974-201ENSMUST00000209974 875 ntBASIC16.02■□□□□ 0.16
Nr1h4Q60641 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nr1h4Q60641 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.02■□□□□ 0.16
Nr1h4Q60641 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h4Q60641 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h4Q60641 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Gm11249-201ENSMUST00000117071 859 ntBASIC16.01■□□□□ 0.15
Nr1h4Q60641 Gm13158-201ENSMUST00000122007 736 ntBASIC16.01■□□□□ 0.15
Nr1h4Q60641 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.01■□□□□ 0.15
Nr1h4Q60641 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h4Q60641 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nr1h4Q60641 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
Nr1h4Q60641 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h4Q60641 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms