Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav7d-4Q5R1H9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Gm26833-201ENSMUST00000180899 440 ntBASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-4Q5R1H9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-4Q5R1H9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms