Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-3Q5R1E6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Gm10698-201ENSMUST00000182663 604 ntBASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-3Q5R1E6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Il3ra-202ENSMUST00000223589 738 ntBASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-3Q5R1E6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-3Q5R1E6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms