Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf43Q5NCP0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Rnf43Q5NCP0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf43Q5NCP0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf43Q5NCP0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf43Q5NCP0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm18733-201ENSMUST00000173950 856 ntBASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm18195-201ENSMUST00000207604 706 ntBASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm5867-201ENSMUST00000063197 592 ntBASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf43Q5NCP0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf43Q5NCP0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Gm10052-201ENSMUST00000168019 960 ntBASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms