Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.66■□□□□ 0.26
Scn2bQ56A07 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Gm24841-201ENSMUST00000158676 357 ntBASIC16.66■□□□□ 0.26
Scn2bQ56A07 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.66■□□□□ 0.26
Scn2bQ56A07 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.66■□□□□ 0.26
Scn2bQ56A07 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.66■□□□□ 0.26
Scn2bQ56A07 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn2bQ56A07 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn2bQ56A07 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2bQ56A07 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Scn2bQ56A07 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2bQ56A07 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Mir1199-201ENSMUST00000117015 119 ntBASIC16.62■□□□□ 0.25
Scn2bQ56A07 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms