Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Rps4l-201ENSMUST00000071745 943 ntBASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx49Q4FZF3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx49Q4FZF3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx49Q4FZF3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx49Q4FZF3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx49Q4FZF3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.46■□□□□ 0.71
Ddx49Q4FZF3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms