Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Gm22697-201ENSMUST00000175194 63 ntBASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Gm18101-201ENSMUST00000215769 548 ntBASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ckap2Q3V1H1 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ckap2Q3V1H1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ckap2Q3V1H1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ckap2Q3V1H1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Gm27389-201ENSMUST00000183622 195 ntBASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.26■□□□□ 0.67
Ckap2Q3V1H1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Haglr-201ENSMUST00000100000 2085 ntBASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms