Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.79■□□□□ 0.6
Brd9Q3UQU0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brd9Q3UQU0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Brd9Q3UQU0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brd9Q3UQU0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brd9Q3UQU0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Brd9Q3UQU0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brd9Q3UQU0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.77■□□□□ 0.59
Brd9Q3UQU0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.77■□□□□ 0.59
Brd9Q3UQU0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brd9Q3UQU0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brd9Q3UQU0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brd9Q3UQU0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Brd9Q3UQU0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brd9Q3UQU0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.73■□□□□ 0.59
Brd9Q3UQU0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.73■□□□□ 0.59
Brd9Q3UQU0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.73■□□□□ 0.59
Brd9Q3UQU0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms