Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Gm11779-201ENSMUST00000118541 368 ntBASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Arhgef40Q3UPH7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Gm25990-201ENSMUST00000102440 86 ntBASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Arhgef40Q3UPH7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Gm7506-201ENSMUST00000207758 815 ntBASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC24.68■■□□□ 1.54
Arhgef40Q3UPH7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Gm2213-201ENSMUST00000197485 688 ntBASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Arhgef40Q3UPH7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 Gm25745-201ENSMUST00000174945 133 ntBASIC24.66■■□□□ 1.54
Arhgef40Q3UPH7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Gm7507-201ENSMUST00000183053 1008 ntBASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef40Q3UPH7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Gm11620-201ENSMUST00000118770 1845 ntBASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Arhgef40Q3UPH7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Arhgef40Q3UPH7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Arhgef40Q3UPH7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Arhgef40Q3UPH7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC24.64■■□□□ 1.53
Arhgef40Q3UPH7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Arhgef40Q3UPH7 Gm5364-201ENSMUST00000216789 889 ntBASIC24.62■■□□□ 1.53
Arhgef40Q3UPH7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Arhgef40Q3UPH7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC24.62■■□□□ 1.53
Arhgef40Q3UPH7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Gm13418-201ENSMUST00000119097 944 ntBASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms