Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1brtQ3UNC9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1brtQ3UNC9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1brtQ3UNC9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms