Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Upf3aQ3ULJ3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Gm18733-201ENSMUST00000173950 856 ntBASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Gm18195-201ENSMUST00000207604 706 ntBASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upf3aQ3ULJ3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Upf3aQ3ULJ3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upf3aQ3ULJ3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upf3aQ3ULJ3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upf3aQ3ULJ3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upf3aQ3ULJ3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms